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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795225.1_cds_XP_016442950.1_3732
CDS Infomation

[gene=LOC107768321] [db_xref=GeneID:107768321] [protein=cell cycle checkpoint protein RAD17-like isoform X3] [protein_id=XP_016442950.1] [location=complement(join(9488..9703,9920..9980,10060..10258,10819..10944,11516..11846,12189..12496,12613..12715,12880..12933,14209..14256,14332..14391))] [gbkey=CDS]
Sequence

ATGTGGGTTGACAAACATAAGCCTCATTTCCTGGAAGAGCTTGCAGTTCACAAGAAGAAG
GTCGAAGAAGTGAAAATATGGTTTGAAGAAAGATTACAAGCTGCAATGGATGATCATAAT
AATGTCCTTCTTGTTGCTGGACCTTCTGGTGTTGGAAAAACTGCAACTATATCTGCTATT
GCTTCACATCTTGGTGCCACAATATGGGAATGGAACACCCCTACTCCAACAGTTTGGTCA
GAACATTTGTATAATGCTAATTCAGGGTTACAATACATGTCAAAGCTGGATGAGTTTGAA
GGTTTTGTTGAAAGGGTGAGAAAGTATGGATTGACTTCTCCAACCTTAAAGGGATCACTG
GCTCCAGTCATACTCTTAGTTGATGATCTTCCGGTGGTAAATGGAAGAGTTGCGTACGGA
AAGCTTCAAAGGTGTTTGAAGCTTCTTGTGCAATTAGTCCGCTTTCCAACAGCCATAGTG
ATCACCAACTATGACAAGGATGACTCTGCAGACTTTAGCACACGCTGCTGGGAAGAACTC
CTTGTGTCTCTTCATAATGCTGGTGCTTGTAAGGTCAACTTCAACCCTGTCACTATCAAC
TCAATCAAGAAAACACTTACAACTATATGCAGAAAGGAGCAGCGTGAAGTTAGTGCTGAT
ACGATTGAGCTAATAGCAAAATCGAGTGGAGGTGACATCAGACATGCAATTACTTCTCTG
CAGTATCTCTGTCTTAACCCACAAAGAAGGCCTATTCTACCTTTAAAAGAAAGACTGGAC
AATATTGTTTGTTTGGATGACGCGTCTTCTTTGCCATTTGGAAAAGATGAAACTCTCTCT
CTATTCCATGCATTAGGCAAATTTCTACACAACAAAAGAGAAAATGAGCTCACAACTGCA
TCAGATAGAGATGCATTTATTCTGAAGGAAAAATTTGTGAGATTTCCTCTTAAAATGGAT
GCTCCAGAAGTTGTACTTTGTCAAGCACATGGGCAAGCGAGGACTCTTTCTGATTTTCTA
CATGAAAATGTTTTAGACTTTTTGAATGAAGAAGCAATAGATGACGCGTGGCTTGTGGCA
TCATATTTAAGCGATGCTGAGTTTCTTCTATCTTCACTTAATAGACTTCTAACCAGAGAC
TTTGGAGCTGAGAACATTGTACAGTCAGCTGCTGCTTCAGTTGCTGCCAGAGGAGTATTA
TTTGGGAATGCTCATCCAGTGCCTTCCAGGTGGCATGCTATTCGACGTCCAAAACTATGG
GAGGTTGAACAATCATTGCGCCGCAATAAGTGTCAAATGTTGAGTCAGAGGGGTGACTTG
TGTAATAGCTTAACATTGTCGAATCAGATAGTTATGGCAACCGAGTATAGACCTGCCCTG
AAATGGCTTGGTTGCCGAGCATCTGAAAGTTTCCAAGCAGATGATATGGTTGAAGATGAC
GGGGGTAGCGCCTGTTTTCATGAGAAGAAGCTGGATATGTCGGATGATGAAATAGAAGAT
TGGTAA

Peptide Sequence

PEP ID

XP_016442950.1
PEP Infomation

PREDICTED: cell cycle checkpoint protein RAD17-like isoform X3 [Nicotiana tabacum]
Sequence

MWVDKHKPHFLEELAVHKKKVEEVKIWFEERLQAAMDDHNNVLLVAGPSGVGKTATISAI
ASHLGATIWEWNTPTPTVWSEHLYNANSGLQYMSKLDEFEGFVERVRKYGLTSPTLKGSL
APVILLVDDLPVVNGRVAYGKLQRCLKLLVQLVRFPTAIVITNYDKDDSADFSTRCWEEL
LVSLHNAGACKVNFNPVTINSIKKTLTTICRKEQREVSADTIELIAKSSGGDIRHAITSL
QYLCLNPQRRPILPLKERLDNIVCLDDASSLPFGKDETLSLFHALGKFLHNKRENELTTA
SDRDAFILKEKFVRFPLKMDAPEVVLCQAHGQARTLSDFLHENVLDFLNEEAIDDAWLVA
SYLSDAEFLLSSLNRLLTRDFGAENIVQSAAASVAARGVLFGNAHPVPSRWHAIRRPKLW
EVEQSLRRNKCQMLSQRGDLCNSLTLSNQIVMATEYRPALKWLGCRASESFQADDMVEDD
GGSACFHEKKLDMSDDEIEDW

Transcript Sequence

Gene sequence data has not been registered.